Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | VP_RS02445 | Q5E7P9 | + | 528362 - 529460 | 41215.9 |
| lysine--trna ligase | VP_RS02450 | Q87SB1 | + | 529495 - 531012 | 57560.7 |
| cyclic-di-gmp-binding transcriptional regulator vpsr | VP_RS02455 | P14375 | + | 531262 - 532596 | 49616.7 |
| hypothetical protein | VP_RS02460 | Not Available | + | 533106 - 533357 | 9890.07 |
| nadp(h)-dependent aldo-keto reductase | VP_RS02465 | P0A9T4 | - | 533491 - 534525 | 38822.3 |
| duf6482 family protein | VP_RS02470 | Not Available | + | 534682 - 534993 | 11804.0 |
| dna mismatch repair endonuclease muth | VP_RS02475 | Q87SA6 | - | 535008 - 535688 | 25526.6 |
| rna pyrophosphohydrolase | VP_RS02480 | Q87SA4 | + | 536307 - 536831 | 20947.4 |
| phosphoenolpyruvate--protein phosphotransferase | VP_RS02485 | P37178 | + | 536834 - 539080 | 83779.3 |
| sulfite exporter taue/safe family protein | VP_RS02490 | P44070 | + | 539087 - 539878 | 27362.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

