Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3545 family protein | VP_RS02395 | Not Available | - | 516836 - 517021 | 7389.76 |
| sodium:alanine symporter family protein | VP_RS02400 | P30143 | + | 517743 - 519176 | 51093.1 |
| peroxide stress protein yaaa | VP_RS02405 | Q87SC0 | + | 519284 - 520060 | 29343.0 |
| atp-dependent rna helicase srmb | VP_RS02410 | P21507 | - | 520166 - 521389 | 46271.1 |
| trna1(val) (adenine(37)-n6)-methyltransferase | VP_RS02415 | Q87SB8 | - | 521497 - 522216 | 26769.0 |
| branched-chain amino acid transport system ii carrier protein | VP_RS02420 | P19072 | + | 522548 - 523861 | 46344.2 |
| flavodoxin fldb | VP_RS02425 | P0ABY6 | - | 523952 - 524470 | 19378.7 |
| site-specific tyrosine recombinase xerd | VP_RS02430 | Q7ZAJ0 | + | 524638 - 525555 | 35135.3 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | VP_RS02435 | P0AEG7 | + | 525615 - 526403 | 28651.2 |
| single-stranded-dna-specific exonuclease recj | VP_RS02440 | P39693 | + | 526449 - 528188 | 64249.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

