Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3293 domain-containing protein | VP_RS02345 | Not Available | + | 506509 - 506916 | 15616.3 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | VP_RS02350 | Q87SD2 | + | 506970 - 507452 | 17709.3 |
| hypothetical protein | VP_RS02355 | Not Available | - | 507449 - 507919 | 17511.3 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | VP_RS02360 | P27725 | + | 508533 - 510992 | 88507.9 |
| homoserine kinase | VP_RS02365 | Q87SC9 | + | 511013 - 511969 | 34437.4 |
| threonine synthase | VP_RS02370 | P44503 | + | 511966 - 513246 | 46515.5 |
| autonomous glycyl radical cofactor grca | VP_RS02375 | Q87SC7 | - | 513386 - 513763 | 13929.4 |
| deoxyribonuclease iv | VP_RS02380 | Q87SC6 | + | 514090 - 514977 | 33018.4 |
| uracil-dna glycosylase | VP_RS02385 | Q87SC4 | + | 515261 - 515941 | 25343.2 |
| hemerythrin domain-containing protein | VP_RS02390 | Not Available | + | 516054 - 516605 | 22074.3 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

