Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylmuramic acid transporter subunit iibc | VP_RS23485 | Q87FD5 | + | 1865492 - 1866946 | 51203.6 |
| porin | VP_RS23490 | Not Available | + | 1867095 - 1868150 | 38747.9 |
| peptidase e | VP_RS23495 | P71089 | - | 1868240 - 1868905 | 24509.3 |
| lysr family transcriptional regulator | VP_RS23500 | Q01610 | - | 1868943 - 1869854 | 34555.6 |
| type c chloramphenicol o-acetyltransferase | VP_RS23505 | P50869 | + | 1869943 - 1870602 | 24674.2 |
| duf342 domain-containing protein | VP_RS23510 | Not Available | - | 1870659 - 1872338 | 60801.9 |
| trna(met) cytidine acetyltransferase tmca | VP_RS23515 | Q9KKJ5 | - | 1872765 - 1874786 | 75896.8 |
| parb/repb/spo0j family partition protein | VP_RS23520 | P0A247 | - | 1874911 - 1875885 | 35694.8 |
| aaa family atpase | VP_RS23525 | P07620 | - | 1875893 - 1877110 | 45977.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

