Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hlyd family type i secretion periplasmic adaptor subunit | VP_RS23435 | P09986 | + | 1852833 - 1854224 | 52053.5 |
| transglutaminase-like cysteine peptidase | VP_RS23440 | Not Available | + | 1854339 - 1855022 | 26100.3 |
| eal domain-containing protein | VP_RS23445 | Not Available | + | 1855028 - 1856941 | 72054.3 |
| type i secretion system permease/atpase | VP_RS23450 | Q9RCG7 | + | 1856957 - 1859071 | 78113.6 |
| mechanosensitive ion channel family protein | VP_RS23455 | Not Available | + | 1859577 - 1860170 | 22302.7 |
| flavodoxin family protein | VP_RS23460 | Q39LI8 | + | 1860307 - 1860900 | 21047.8 |
| abc transporter substrate-binding protein | VP_RS23465 | P23843 | - | 1860970 - 1862595 | 60851.6 |
| murein tripeptide amidase mpaa | VP_RS23470 | A7N805 | + | 1862737 - 1863447 | 26109.2 |
| sis domain-containing protein | VP_RS23475 | A8ADG3 | - | 1863467 - 1864318 | 30843.0 |
| n-acetylmuramic acid 6-phosphate etherase | VP_RS23480 | Q87FD6 | + | 1864561 - 1865463 | 31431.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

