Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | VP_RS23385 | Not Available | - | 1839187 - 1839426 | 8822.84 |
| gnat family n-acetyltransferase | VP_RS23390 | Not Available | + | 1839575 - 1840105 | 20015.7 |
| sodium/proline symporter putp | VP_RS23395 | P94392 | - | 1840181 - 1841674 | 53047.1 |
| 1-pyrroline-5-carboxylate dehydrogenase | VP_RS23400 | Not Available | - | 1841811 - 1842518 | 25476.1 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | VP_RS23405 | O52485 | - | 1842530 - 1845661 | 115003.0 |
| arac family transcriptional regulator | VP_RS23410 | Q51872 | - | 1846049 - 1846861 | 30364.4 |
| pas domain-containing protein | VP_RS23415 | Not Available | + | 1847665 - 1848420 | 28519.1 |
| pyridoxamine 5'-phosphate oxidase | VP_RS23420 | Q87FE9 | - | 1848497 - 1849132 | 24249.1 |
| atp-binding protein | VP_RS23425 | Q9HU20 | + | 1849594 - 1851444 | 68867.4 |
| sigma-54 dependent transcriptional regulator | VP_RS23430 | Q9HU19 | + | 1851437 - 1852663 | 46670.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

