Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | VP_RS23195 | Not Available | + | 1801169 - 1802266 | 40054.9 |
| organic hydroperoxide resistance protein | VP_RS23200 | P70736 | - | 1802344 - 1802766 | 14499.2 |
| marr family winged helix-turn-helix transcriptional regulator | VP_RS23205 | O34777 | + | 1802892 - 1803350 | 16954.6 |
| alkyl hydroperoxide reductase subunit c | VP_RS23210 | P0A252 | + | 1803624 - 1804181 | 20573.2 |
| alkyl hydroperoxide reductase subunit f | VP_RS23215 | P0A155 | + | 1804339 - 1805907 | 56111.4 |
| voc family protein | VP_RS23220 | Not Available | + | 1806249 - 1806668 | 16045.8 |
| cap domain-containing protein | VP_RS23225 | Not Available | - | 1806745 - 1807284 | 18792.6 |
| lysr family transcriptional regulator | VP_RS23230 | Not Available | - | 1807412 - 1808368 | 36050.1 |
| dj-1/pfpi family protein | VP_RS23235 | Not Available | + | 1808495 - 1809181 | 24724.4 |
| sigma-70 family rna polymerase sigma factor | VP_RS23240 | A0R2D4 | + | 1809266 - 1809751 | 19343.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

