Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | VP_RS23145 | P59916 | + | 1789143 - 1791134 | 74194.9 |
| l-arabinose abc transporter permease arah | VP_RS23150 | P0AE26 | - | 1791228 - 1792217 | 34359.0 |
| l-arabinose abc transporter atp-binding protein arag | VP_RS23155 | Q87FK7 | - | 1792232 - 1793746 | 55491.7 |
| arabinose abc transporter substrate-binding protein | VP_RS23160 | P02924 | - | 1793803 - 1794804 | 36269.5 |
| ribulokinase | VP_RS23165 | Q87FK5 | + | 1795176 - 1796879 | 61792.2 |
| l-ribulose-5-phosphate 4-epimerase | VP_RS23170 | P0C1B9 | + | 1796872 - 1797612 | 27029.9 |
| l-arabinose isomerase | VP_RS23175 | Q87FK3 | + | 1797622 - 1799115 | 54864.7 |
| hypothetical protein | VP_RS23180 | Not Available | + | 1799162 - 1799680 | 20193.6 |
| arabinose operon transcriptional regulator arac | VP_RS23185 | P07642 | + | 1799737 - 1800576 | 32402.6 |
| duf3297 family protein | VP_RS23190 | Not Available | + | 1800647 - 1800892 | 9236.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

