Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose pts transporter subunit eiib | VP_RS22945 | Not Available | + | 1731307 - 1731603 | 10859.2 |
| ribosome small subunit-dependent gtpase a | VP_RS22950 | Q87FP9 | + | 1731917 - 1732993 | 39805.1 |
| serine/threonine transporter sstt | VP_RS22955 | Q87FP8 | + | 1733349 - 1734566 | 42308.5 |
| type iv pilin | VP_RS22960 | Not Available | + | 1734788 - 1735282 | 18234.2 |
| pyridoxal kinase pdxy | VP_RS22965 | Q87FP6 | - | 1735333 - 1736202 | 31572.9 |
| abrb/maze/spovt family dna-binding domain-containing protein | VP_RS22970 | Not Available | - | 1736304 - 1736492 | 6803.27 |
| putrescine-ornithine antiporter | VP_RS22975 | P0AAF2 | - | 1736640 - 1737950 | 46180.9 |
| ornithine decarboxylase spef | VP_RS22980 | P44317 | - | 1738012 - 1740192 | 82345.2 |
| helix-turn-helix transcriptional regulator | VP_RS22985 | Not Available | - | 1740603 - 1741049 | 16786.3 |
| tetratricopeptide repeat protein | VP_RS22990 | Not Available | - | 1741747 - 1742943 | 44655.5 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

