Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | VP_RS22895 | P25718 | - | 1714130 - 1716190 | 76977.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | VP_RS22900 | Q87FR1 | - | 1716371 - 1717048 | 25630.2 |
| 1,4-alpha-glucan branching protein glgb | VP_RS22905 | Q87FR0 | - | 1717200 - 1719449 | 86750.7 |
| 4-alpha-glucanotransferase | VP_RS22910 | P15977 | - | 1719663 - 1721843 | 81846.2 |
| glycogen/starch/alpha-glucan phosphorylase | VP_RS22915 | P00490 | - | 1721961 - 1724414 | 92405.6 |
| hth-type transcriptional regulator malt | VP_RS22920 | Q87FQ5 | + | 1725168 - 1727876 | 104083.0 |
| duf368 domain-containing protein | VP_RS22925 | Not Available | + | 1728467 - 1729384 | 33661.3 |
| hypothetical protein | VP_RS22930 | Not Available | + | 1729630 - 1730055 | 15329.9 |
| sco family protein | VP_RS22935 | Q92H76 | + | 1730065 - 1730679 | 22716.0 |
| copper chaperone pcu(a)c | VP_RS22940 | Not Available | + | 1730669 - 1731130 | 16588.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

