Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | VP_RS22845 | P0ACX3 | - | 1704964 - 1705272 | 11369.7 |
| lysr family transcriptional regulator | VP_RS22850 | Not Available | + | 1705382 - 1706272 | 32923.6 |
| duf1835 domain-containing protein | VP_RS22855 | Not Available | + | 1706553 - 1707824 | 48523.6 |
| dicarboxylate/amino acid:cation symporter | VP_RS22860 | O59010 | + | 1708226 - 1709530 | 45435.7 |
| ykva family protein | VP_RS22865 | Not Available | - | 1709635 - 1710009 | 13276.0 |
| m20 family metallopeptidase | VP_RS22870 | Not Available | - | 1710175 - 1711299 | 40425.2 |
| yjig family protein | VP_RS22875 | P0AEI0 | - | 1711309 - 1711776 | 16234.8 |
| nucleoside recognition domain-containing protein | VP_RS22880 | P39379 | - | 1711776 - 1712513 | 26243.9 |
| hypothetical protein | VP_RS22885 | Not Available | + | 1712962 - 1713249 | 10976.3 |
| dsba family protein | VP_RS22890 | Not Available | + | 1713346 - 1714062 | 27140.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

