Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein activator | VP_RS02140 | D0M814 | - | 449087 - 450898 | 67560.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | VP_RS02145 | Q9KUD9 | + | 450967 - 451830 | 31696.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | VP_RS02155 | Q9AJH1 | + | 452602 - 453552 | 35216.2 |
| cell division protein ftsl | VP_RS02160 | Q9KPG0 | + | 453558 - 453875 | 11928.7 |
| penicillin-binding protein 3 | VP_RS02165 | P0AD69 | + | 453872 - 455665 | 65503.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | VP_RS02170 | Q87SG9 | + | 455726 - 457207 | 52989.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | VP_RS02175 | P11880 | + | 457204 - 458568 | 48738.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | VP_RS02180 | Q87SG7 | + | 458568 - 459650 | 39946.2 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | VP_RS02185 | Q87SG6 | + | 459690 - 461003 | 47234.6 |
| cell division protein ftsw | VP_RS02190 | Q7MNV2 | + | 461022 - 462218 | 43975.8 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

