Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| azurin | VP_RS21995 | P00281 | + | 1502840 - 1503292 | 15829.8 |
| eal domain-containing protein | VP_RS22000 | P46317 | - | 1503361 - 1505406 | 75456.8 |
| trkh family potassium uptake protein | VP_RS22005 | O32081 | - | 1505793 - 1507157 | 49431.5 |
| trka family potassium uptake protein | VP_RS22010 | O32080 | - | 1507159 - 1507812 | 23857.1 |
| response regulator transcription factor | VP_RS22015 | P9WGN0 | - | 1507964 - 1508662 | 26418.0 |
| duf4118 domain-containing protein | VP_RS22020 | Q2FWH7 | - | 1508659 - 1509693 | 38173.1 |
| abc transporter atp-binding protein | VP_RS22025 | Q57180 | - | 1509953 - 1511779 | 68167.7 |
| tonb-dependent siderophore receptor | VP_RS22030 | Q01674 | + | 1511925 - 1514015 | 77063.3 |
| abc transporter atp-binding protein | VP_RS22035 | P07821 | + | 1514068 - 1514853 | 28323.5 |
| iron-siderophore abc transporter substrate-binding protein | VP_RS22040 | Not Available | + | 1514844 - 1515773 | 34843.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

