Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gatb/yqey domain-containing protein | VP_RS01940 | P54464 | - | 407856 - 408299 | 16146.8 |
| 30s ribosomal protein s21 | VP_RS01945 | A7MWP7 | - | 408328 - 408543 | 8487.44 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | VP_RS01950 | Q87SL5 | + | 408774 - 409790 | 36258.9 |
| alpha/beta fold hydrolase | VP_RS01955 | O31452 | + | 409948 - 410763 | 30230.4 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | VP_RS01960 | Q87SL3 | - | 410785 - 411396 | 21732.5 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | VP_RS01965 | P0AC17 | + | 411645 - 412004 | 13384.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | VP_RS01970 | P26281 | + | 412001 - 412483 | 18477.1 |
| undecaprenyl-diphosphate phosphatase | VP_RS01975 | Q87SL0 | + | 412499 - 413302 | 29278.8 |
| multifunctional cca addition/repair protein | VP_RS01980 | Q87SK9 | - | 413355 - 414575 | 45493.8 |
| exea family protein | VP_RS01985 | Not Available | + | 414714 - 416333 | 60515.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

