Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ecoai/ftnuii family type i restriction enzme subunit r | VP_RS01890 | Q47281 | - | 393448 - 395892 | 92700.4 |
| marr family transcriptional regulator | VP_RS01895 | Not Available | - | 396683 - 397840 | 44707.1 |
| alpa family transcriptional regulator | VP_RS01900 | Not Available | + | 397941 - 398105 | 6526.95 |
| restriction endonuclease | VP_RS01905 | Not Available | + | 398559 - 399374 | 30659.1 |
| hypothetical protein | VP_RS01910 | Not Available | - | 399825 - 401414 | 60369.8 |
| hipa domain-containing protein | VP_RS01915 | Q8EIX3 | - | 401699 - 403105 | 52292.3 |
| helix-turn-helix domain-containing protein | VP_RS01920 | Not Available | - | 403098 - 403433 | 12531.2 |
| Trna-met | Not Available | Not Available | + | 403769 - 403844 | Not Available |
| rna polymerase sigma factor rpod | VP_RS01930 | P0A2E4 | - | 403985 - 405847 | 70714.8 |
| dna primase | VP_RS01935 | Q8FDG5 | - | 405947 - 407707 | 66264.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

