Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | VP_RS01540 | P31549 | + | 312828 - 314414 | 58171.6 |
| thiamine abc transporter atp-binding protein | VP_RS01545 | Q87SV4 | + | 314414 - 315118 | 25970.4 |
| universal stress protein | VP_RS01550 | Not Available | - | 315182 - 315619 | 16108.8 |
| trap transporter permease | VP_RS01555 | Not Available | - | 315664 - 318243 | 92472.4 |
| taxi family trap transporter solute-binding subunit | VP_RS01560 | P0A3T3 | - | 318541 - 319509 | 34553.2 |
| transcriptional regulator argr | VP_RS01565 | A7MWD9 | - | 319915 - 320385 | 16976.6 |
| malate dehydrogenase | VP_RS01570 | Q87SU7 | + | 320744 - 321679 | 32173.9 |
| hypothetical protein | VP_RS01575 | Not Available | + | 321793 - 321984 | 7014.21 |
| octaprenyl diphosphate synthase | VP_RS01580 | P0AD57 | - | 322076 - 323047 | 35383.3 |
| 50s ribosomal protein l21 | VP_RS01585 | Q87SU4 | + | 323305 - 323616 | 11522.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

