Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2780 domain-containing protein | VP_RS01390 | Not Available | - | 281243 - 281722 | 16403.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | VP_RS01395 | P0A9L3 | - | 281860 - 282480 | 21840.8 |
| lysm-like peptidoglycan-binding domain-containing protein | VP_RS01400 | Not Available | + | 282713 - 283312 | 23109.2 |
| gnat family n-acetyltransferase | VP_RS01405 | P0AEH3 | - | 283379 - 283840 | 17231.7 |
| atp-dependent rna helicase dbpa | VP_RS01410 | P21693 | + | 283987 - 285366 | 50403.2 |
| crp/fnr family transcriptional regulator | VP_RS01415 | Not Available | - | 285425 - 285997 | 22383.7 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | VP_RS01420 | P26265 | - | 286106 - 288067 | 72385.5 |
| uroporphyrinogen-iii c-methyltransferase | VP_RS01425 | Q6LM67 | + | 288334 - 289209 | 31442.8 |
| sulfate adenylyltransferase subunit cysd | VP_RS01430 | Q87SY0 | + | 289269 - 290177 | 34984.8 |
| sulfate adenylyltransferase subunit cysn | VP_RS01435 | Q87SX9 | + | 290196 - 291626 | 52597.3 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

