Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-grasp domain-containing protein | VP_RS01140 | Not Available | + | 244604 - 245569 | 36444.7 |
| had family hydrolase | VP_RS01145 | Not Available | + | 245556 - 246218 | 25521.3 |
| degt/dnrj/eryc1/strs aminotransferase family protein | VP_RS01150 | P39623 | + | 246212 - 247387 | 43402.7 |
| nucleoside-diphosphate sugar epimerase/dehydratase | VP_RS01155 | P39853 | + | 247555 - 249504 | 71105.8 |
| nucleotide sugar dehydrogenase | VP_RS01160 | O33952 | + | 249662 - 250828 | 43168.6 |
| utp--glucose-1-phosphate uridylyltransferase galu | VP_RS01165 | Not Available | + | 250898 - 251776 | 32327.0 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | VP_RS01170 | Q5SLP1 | - | 251930 - 253279 | 50019.3 |
| triose-phosphate isomerase | VP_RS01175 | Q87T31 | - | 253572 - 254342 | 26933.9 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | VP_RS01180 | Not Available | + | 254613 - 254960 | 13000.5 |
| duf805 domain-containing protein | VP_RS01185 | Not Available | + | 255059 - 255481 | 15848.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

