Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | VP_RS01090 | P37777 | + | 235048 - 236136 | 40916.2 |
| glucose-1-phosphate thymidylyltransferase rfba | VP_RS01095 | P55255 | + | 236136 - 237011 | 32276.6 |
| sugar nucleotide-binding protein | VP_RS01100 | Not Available | + | 237008 - 237880 | 32459.0 |
| capsule biosynthesis protein capf | VP_RS01105 | Not Available | + | 238188 - 239042 | 33081.7 |
| glycosyltransferase family 2 protein | VP_RS01110 | Not Available | + | 239039 - 239860 | 31767.0 |
| hypothetical protein | VP_RS01115 | Not Available | + | 239857 - 241014 | 44993.8 |
| o-antigen polymerase | VP_RS01120 | Not Available | + | 241016 - 242245 | 46421.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | VP_RS01125 | P37780 | + | 242226 - 242789 | 21240.2 |
| glycosyltransferase family 4 protein | VP_RS01130 | Not Available | + | 242793 - 244031 | 45569.5 |
| sugar transferase | VP_RS01135 | P71062 | + | 244015 - 244614 | 22844.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

