Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | VP_RS00890 | Q87T89 | - | 194074 - 195273 | 42630.8 |
| methyl-accepting chemotaxis protein | VP_RS00895 | Q9I0I6 | + | 195458 - 197131 | 60589.8 |
| dna repair protein radc | VP_RS00900 | Q87T86 | + | 197245 - 197919 | 25335.6 |
| 50s ribosomal protein l28 | VP_RS00905 | Q87T85 | + | 198223 - 198459 | 9032.09 |
| 50s ribosomal protein l33 | VP_RS00910 | A7MSP9 | + | 198473 - 198643 | 6524.11 |
| phosphoethanolamine transferase | VP_RS00915 | P44974 | + | 198731 - 200263 | 57434.9 |
| hypothetical protein | VP_RS00920 | Not Available | + | 200333 - 200809 | 18910.5 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | VP_RS00925 | Q87T81 | + | 200912 - 201721 | 30097.4 |
| pantetheine-phosphate adenylyltransferase | VP_RS00930 | Q87T80 | + | 201818 - 202300 | 17828.6 |
| glycosyl transferase family 90 | VP_RS00935 | P39907 | + | 202287 - 203222 | 36911.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

