Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tex family protein | VP_RS00740 | P46837 | - | 158944 - 161265 | 85133.5 |
| rimk/lysx family protein | VP_RS00745 | Not Available | + | 161478 - 163358 | 70452.0 |
| transcription elongation factor greb | VP_RS00750 | Q87TB8 | + | 163513 - 164004 | 19248.8 |
| duf1090 domain-containing protein | VP_RS00755 | Not Available | + | 164118 - 164510 | 14652.4 |
| two-component system response regulator ompr | VP_RS00760 | P0AA18 | + | 164729 - 165448 | 27364.3 |
| two-component system sensor histidine kinase envz | VP_RS00765 | P0AEJ4 | + | 165554 - 166846 | 47605.6 |
| uracil-xanthine permease family protein | VP_RS00770 | P0AGN1 | - | 166911 - 168302 | 48756.9 |
| atp-dependent dna helicase recg | VP_RS00775 | Q8XD86 | - | 168535 - 170616 | 76727.4 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | VP_RS00780 | P0AGJ3 | - | 170735 - 171418 | 25610.8 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | VP_RS00785 | Q9KNM2 | - | 171476 - 173596 | 79829.4 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

