Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | VP_RS00490 | Q87TH4 | + | 104921 - 105700 | 28966.6 |
| scp2 domain-containing protein | VP_RS00495 | P0ADP7 | + | 105712 - 106347 | 23647.4 |
| ubiquinone biosynthesis regulatory protein kinase ubib | VP_RS00500 | Q87TH2 | + | 106344 - 107978 | 62489.8 |
| sec-independent protein translocase subunit tata | VP_RS00505 | Q87TH1 | + | 108027 - 108272 | 8790.63 |
| sec-independent protein translocase protein tatb | VP_RS00510 | Q87TH0 | + | 108276 - 108674 | 14579.4 |
| twin-arginine translocase subunit tatc | VP_RS00515 | P44560 | + | 108743 - 109483 | 27657.4 |
| tatd family hydrolase | VP_RS00520 | P44718 | - | 109950 - 110711 | 28643.1 |
| porphobilinogen synthase | VP_RS00525 | Q59643 | + | 110893 - 111954 | 39186.0 |
| gnat family n-acetyltransferase | VP_RS00530 | Not Available | + | 112096 - 112530 | 16477.0 |
| dna polymerase i | VP_RS00535 | P00582 | + | 113147 - 115942 | 103125.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

