Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxylate/amino acid/amine transporter | VP_RS00390 | O68826 | - | 86850 - 87728 | 32255.3 |
| universal stress protein uspa | VP_RS00395 | Q8ZA49 | - | 87793 - 88218 | 15682.8 |
| non-heme ferritin | VP_RS00400 | P43707 | + | 88446 - 88973 | 19952.6 |
| universal stress protein uspb | VP_RS00405 | Q87TJ1 | + | 89064 - 89387 | 12296.2 |
| nad(p)/fad-dependent oxidoreductase | VP_RS00410 | P37631 | + | 89545 - 90738 | 43752.7 |
| sigma-54-dependent fis family transcriptional regulator | VP_RS00415 | P12626 | - | 90824 - 92167 | 50257.8 |
| bon domain-containing protein | VP_RS00420 | Not Available | + | 92601 - 93152 | 19586.9 |
| duf1328 family protein | VP_RS00425 | Q87TI7 | + | 93198 - 93374 | 6244.11 |
| hypothetical protein | VP_RS00430 | Not Available | + | 93383 - 93580 | 7085.3 |
| hemerythrin domain-containing protein | VP_RS00435 | Not Available | + | 93672 - 94103 | 16878.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

