Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division topological specificity factor mine | VP_RS04240 | Q87RC5 | - | 905636 - 905899 | 10071.1 |
| septum site-determining protein mind | VP_RS04245 | P0AEZ5 | - | 905902 - 906714 | 29484.4 |
| septum site-determining protein minc | VP_RS04250 | Q87RC3 | - | 906732 - 907394 | 23402.0 |
| ycgl domain-containing protein | VP_RS04255 | Q87RC2 | + | 907592 - 907876 | 10836.2 |
| lytic transglycosylase domain-containing protein | VP_RS04260 | P41052 | + | 907921 - 908892 | 36742.5 |
| lysr family transcriptional regulator | VP_RS04265 | P43011 | + | 908967 - 909911 | 35467.5 |
| nupc/nupg family nucleoside cnt transporter | VP_RS04270 | P44742 | + | 910217 - 911416 | 41629.0 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | VP_RS04275 | Q87RB8 | - | 911485 - 912345 | 30808.2 |
| Trna-arg | Not Available | Not Available | + | 912549 - 912625 | Not Available |
| class i sam-dependent methyltransferase | VP_RS04285 | Not Available | + | 912790 - 914481 | 64301.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

