Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | VP_RS04190 | Q87RD6 | - | 894392 - 896125 | 63874.3 |
| voc family protein | VP_RS04195 | P52007 | + | 896346 - 896945 | 22633.0 |
| formyltetrahydrofolate deformylase | VP_RS04200 | P0A440 | - | 897019 - 897852 | 31621.9 |
| atp-dependent dna helicase | VP_RS04205 | P76257 | + | 898070 - 899980 | 70983.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | VP_RS04210 | Q87RD1 | + | 900037 - 900738 | 25152.8 |
| hypothetical protein | VP_RS04215 | Not Available | + | 900790 - 901095 | 11084.4 |
| slp family lipoprotein | VP_RS04220 | Not Available | + | 901135 - 901692 | 20799.0 |
| alpha/beta fold hydrolase | VP_RS04225 | Q54M29 | + | 901698 - 902552 | 32079.4 |
| long-chain-fatty-acid--coa ligase fadd | VP_RS04230 | Q8ZES9 | + | 902659 - 904350 | 62702.1 |
| ribonuclease d | VP_RS04235 | C6C608 | + | 904430 - 905548 | 42356.4 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

