Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | VP_RS04140 | Q87RE8 | + | 881826 - 882992 | 41544.9 |
| succinate--coa ligase subunit alpha | VP_RS04145 | Q51567 | + | 882992 - 883864 | 29995.3 |
| zinc abc transporter permease subunit znub | VP_RS04150 | P39832 | - | 884002 - 884787 | 27782.2 |
| zinc abc transporter atp-binding protein znuc | VP_RS04155 | Q87RE5 | - | 884780 - 885568 | 29014.0 |
| zinc abc transporter substrate-binding protein znua | VP_RS04160 | Q8ZEU2 | + | 885647 - 886525 | 32151.3 |
| arac family transcriptional regulator | VP_RS04165 | Not Available | + | 886736 - 890107 | 126876.0 |
| feoa family protein | VP_RS04170 | Not Available | + | 890989 - 891216 | 8339.53 |
| fe(2+) transporter permease subunit feob | VP_RS04175 | P74884 | + | 891216 - 893492 | 82560.4 |
| feoc-like transcriptional regulator | VP_RS04180 | Not Available | + | 893489 - 893719 | 8588.45 |
| hit domain-containing protein | VP_RS04185 | Not Available | - | 893838 - 894266 | 16068.5 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

