Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | VP_RS04090 | P36938 | + | 869036 - 870682 | 59283.3 |
| duf1853 family protein | VP_RS04095 | Not Available | - | 870747 - 871517 | 29894.5 |
| nif3-like dinuclear metal center hexameric protein | VP_RS04100 | Q9KQA7 | + | 871655 - 872413 | 28010.6 |
| citrate synthase | VP_RS04105 | O68883 | - | 872495 - 873784 | 48221.7 |
| succinate dehydrogenase cytochrome b556 subunit | VP_RS04110 | P63726 | + | 874180 - 874572 | 14104.7 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | VP_RS04115 | P0AC45 | + | 874566 - 874910 | 12764.9 |
| succinate dehydrogenase flavoprotein subunit | VP_RS04120 | P0AC43 | + | 874911 - 876677 | 64251.4 |
| succinate dehydrogenase iron-sulfur subunit | VP_RS04125 | P07014 | + | 876692 - 877402 | 26326.8 |
| 2-oxoglutarate dehydrogenase e1 component | VP_RS04130 | P0AFG5 | + | 877572 - 880397 | 106089.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | VP_RS04135 | P0AFG7 | + | 880426 - 881631 | 43704.8 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

