Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone ybbn | VP_RS03945 | P77395 | - | 839599 - 840453 | 31468.6 |
| sdr family oxidoreductase | VP_RS03950 | P0AFP5 | - | 840902 - 841729 | 30588.9 |
| tigr01777 family oxidoreductase | VP_RS03955 | P77775 | - | 841768 - 842685 | 34151.6 |
| duf1538 domain-containing protein | VP_RS03960 | A0A1X9QDU4 | + | 842971 - 843705 | 25905.6 |
| duf1538 domain-containing protein | VP_RS03965 | A0A1X9QDU5 | + | 843702 - 844493 | 28382.1 |
| p-ii family nitrogen regulator | VP_RS03970 | Not Available | + | 844483 - 844833 | 12807.2 |
| cbs domain-containing protein | VP_RS03975 | Not Available | + | 844830 - 845237 | 15226.7 |
| hypothetical protein | VP_RS23745 | Not Available | + | 845380 - 845589 | 7804.76 |
| phosphodiesterase | VP_RS03980 | P67097 | + | 845659 - 846204 | 20000.2 |
| selt/selw/selh family protein | VP_RS03985 | Not Available | - | 846263 - 846541 | 10871.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

