Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-protein phosphotransferase ptsi | VP_RS03895 | P08839 | - | 827765 - 829489 | 63195.9 |
| hpr family phosphocarrier protein | VP_RS03900 | Q9KTD6 | - | 829630 - 829887 | 9108.91 |
| cysteine synthase a | VP_RS03905 | P0ABK6 | - | 830186 - 831154 | 34135.1 |
| sulfate transporter cysz | VP_RS03910 | Q87RJ6 | - | 831318 - 832061 | 28190.3 |
| cell division protein zipa | VP_RS03915 | Q87RJ5 | + | 832311 - 833261 | 35293.8 |
| nad-dependent dna ligase liga | VP_RS03920 | Q87RJ4 | + | 833351 - 835363 | 73992.5 |
| porin | VP_RS03925 | P75733 | + | 835874 - 837283 | 51782.0 |
| hypothetical protein | VP_RS03930 | Not Available | - | 837327 - 837509 | 6446.1 |
| nfed family protein | VP_RS03935 | Not Available | - | 838050 - 838511 | 17658.5 |
| spfh domain-containing protein | VP_RS03940 | P0AA55 | - | 838521 - 839438 | 33376.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

