Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | VP_RS00290 | Not Available | - | 63253 - 63825 | 22065.5 |
| hypothetical protein | VP_RS00295 | Not Available | - | 63828 - 65300 | 56331.8 |
| serine/threonine-protein kinase | VP_RS00300 | Q8ICR0 | - | 65314 - 66666 | 51421.1 |
| substrate-binding domain-containing protein | VP_RS00305 | P0ACP6 | + | 66886 - 67893 | 36896.4 |
| lysr family transcriptional regulator | VP_RS00310 | P10151 | + | 67949 - 68884 | 35466.0 |
| multidrug transporter subunit mdtj | VP_RS00315 | A9MRT9 | + | 69154 - 69558 | 14470.9 |
| smr family transporter | VP_RS00320 | Q7N536 | + | 69555 - 69884 | 11579.8 |
| phosphogluconate dehydratase | VP_RS00325 | P0ADF7 | - | 69959 - 71755 | 63547.2 |
| gluconokinase | VP_RS00330 | P39208 | - | 71755 - 72279 | 19589.7 |
| gntp family permease | VP_RS00335 | Q46892 | + | 72433 - 73809 | 47162.6 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

