Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-sugar hydrolase/5'-nucleotidase usha | VP_RS03695 | P22848 | + | 784866 - 786548 | 62178.3 |
| cys-trna(pro) deacylase | VP_RS03700 | P37174 | + | 786657 - 787130 | 16907.7 |
| 23s rrna pseudouridine(2604) synthase rluf | VP_RS03705 | Q8Z1V3 | - | 787187 - 788302 | 41831.9 |
| dna endonuclease smra | VP_RS03710 | P76053 | - | 788402 - 788983 | 22385.9 |
| duf3149 domain-containing protein | VP_RS03715 | Not Available | - | 789115 - 789255 | 5225.54 |
| Trna-pro | Not Available | Not Available | + | 789515 - 789591 | Not Available |
| trab/gumn family protein | VP_RS03725 | Not Available | - | 789897 - 790769 | 31997.8 |
| beta-n-acetylhexosaminidase | VP_RS03730 | P13670 | + | 791330 - 793981 | 97661.5 |
| oligogalacturonate-specific porin kdgm family protein | VP_RS03735 | Not Available | + | 794418 - 795110 | 25154.8 |
| duf411 domain-containing protein | VP_RS03740 | Not Available | - | 795175 - 795624 | 16750.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

