Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | VP_RS03490 | Q87RQ0 | - | 761473 - 764046 | 96659.5 |
| zinc ribbon-containing protein | VP_RS03495 | P0AAU1 | + | 764202 - 764672 | 17482.7 |
| apolipoprotein n-acyltransferase | VP_RS03500 | Q87RP8 | - | 764769 - 766286 | 56903.4 |
| cnnm family magnesium/cobalt transport protein corc | VP_RS03505 | Q9KTE3 | - | 766326 - 767225 | 33940.8 |
| rrna maturation rnase ybey | VP_RS03510 | Q87RP6 | - | 767332 - 767796 | 17649.9 |
| phoh family protein | VP_RS03515 | P0A9K5 | - | 767799 - 768896 | 40974.2 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | VP_RS03520 | Q87RP4 | - | 768970 - 770394 | 53716.5 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | VP_RS03525 | P75728 | + | 770653 - 771828 | 43533.1 |
| Trna-leu | Not Available | Not Available | + | 771968 - 772052 | Not Available |
| Trna-gln | Not Available | Not Available | + | 772106 - 772180 | Not Available |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

