Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | VP_RS03440 | Q87RR0 | - | 752442 - 753104 | 24652.5 |
| duf493 family protein ybed | VP_RS03445 | Q87RQ9 | - | 753281 - 753559 | 10301.6 |
| serine hydrolase | VP_RS03450 | P0AEB4 | - | 753698 - 754876 | 43293.7 |
| septal ring lytic transglycosylase rlpa family protein | VP_RS03455 | Q9KTF4 | - | 754969 - 755772 | 29746.0 |
| rod shape-determining protein roda | VP_RS03460 | P0ABG8 | - | 755775 - 756896 | 40810.7 |
| penicillin-binding protein 2 | VP_RS03465 | P0AD67 | - | 756896 - 758821 | 73068.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | VP_RS03470 | Q87RQ4 | - | 758851 - 759321 | 17418.2 |
| ribosome silencing factor | VP_RS03475 | P0AAT7 | - | 759326 - 759643 | 11852.2 |
| dna polymerase iii subunit delta | VP_RS03480 | P28630 | - | 759734 - 760753 | 38883.2 |
| lps assembly lipoprotein lpte | VP_RS03485 | A8GB20 | - | 760759 - 761301 | 20472.6 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

