Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein metn | VP_RS03390 | Q87RS1 | - | 739918 - 740952 | 37569.6 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | VP_RS03395 | Q9KTJ4 | + | 741295 - 741846 | 20472.3 |
| trehalose operon repressor trer | VP_RS03400 | P36674 | + | 741949 - 742896 | 34572.5 |
| pts trehalose transporter subunit iibc | VP_RS03405 | P36672 | + | 743073 - 744497 | 50702.1 |
| alpha,alpha-phosphotrehalase | VP_RS03410 | P39795 | + | 744585 - 746270 | 64636.6 |
| hypothetical protein | VP_RS03415 | Not Available | - | 746375 - 747274 | 33175.7 |
| winged helix-turn-helix domain-containing protein | VP_RS03420 | Not Available | - | 747406 - 748926 | 57787.5 |
| yitt family protein | VP_RS03425 | P42978 | - | 749017 - 749619 | 21893.1 |
| serine hydroxymethyltransferase | VP_RS03430 | Q87RR2 | + | 749967 - 751217 | 45507.2 |
| lipoyl synthase | VP_RS03435 | Q87RR1 | - | 751480 - 752445 | 36453.3 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

