Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna/rna non-specific endonuclease | VP_RS03340 | P81203 | - | 728464 - 729216 | 28098.7 |
| flap endonuclease xni | VP_RS03345 | Q87RT0 | - | 729410 - 730192 | 29266.8 |
| nucleotide 5'-monophosphate nucleosidase ppnn | VP_RS03350 | P0ADS0 | - | 730266 - 731627 | 50590.9 |
| diguanylate cyclase | VP_RS03355 | A0A0H2ZJS2 | - | 731917 - 733482 | 60172.9 |
| hypothetical protein | VP_RS03360 | Not Available | - | 733581 - 735863 | 87998.3 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | VP_RS03365 | Q87RS6 | - | 736026 - 736871 | 32114.7 |
| secy-interacting protein | VP_RS03370 | Q87RS5 | + | 736980 - 737525 | 20612.4 |
| zn-ribbon-containing protein | VP_RS03375 | P44154 | + | 737528 - 738304 | 29659.3 |
| metq/nlpa family lipoprotein | VP_RS03380 | Not Available | - | 738409 - 739218 | 29071.6 |
| methionine abc transporter permease | VP_RS03385 | Q9KTJ6 | - | 739251 - 739928 | 23591.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

