Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | VP_RS03240 | Q87RV0 | + | 709222 - 710361 | 39988.1 |
| glutamate-5-semialdehyde dehydrogenase | VP_RS03245 | Q87RU9 | + | 710379 - 711629 | 44695.8 |
| transcriptional regulator nrdr | VP_RS03250 | Q87RU8 | + | 711757 - 712206 | 17072.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | VP_RS03255 | P25539 | + | 712214 - 713338 | 40743.2 |
| riboflavin synthase | VP_RS03260 | P51961 | + | 713351 - 714004 | 23792.5 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | VP_RS03265 | P51962 | + | 714174 - 715283 | 40114.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | VP_RS03270 | A7MWU0 | + | 715453 - 715923 | 16432.8 |
| transcription antitermination factor nusb | VP_RS03275 | Q87RU3 | + | 715923 - 716390 | 17571.1 |
| thiamine-phosphate kinase | VP_RS03280 | P0AGG1 | + | 716474 - 717439 | 34533.8 |
| phosphatidylglycerophosphatase a | VP_RS03285 | P18200 | + | 717477 - 717983 | 18459.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

