Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | VP_RS03095 | Q87RY2 | - | 674836 - 675321 | 18400.5 |
| srpbcc family protein | VP_RS03100 | A5F376 | + | 675440 - 675883 | 16299.7 |
| rnfh family protein | VP_RS03105 | Q87RY0 | + | 675873 - 676220 | 12985.7 |
| outer membrane protein assembly factor bame | VP_RS03110 | A5F378 | - | 676321 - 676680 | 13485.2 |
| dna repair protein recn | VP_RS03115 | A5F379 | - | 676920 - 678584 | 61416.5 |
| duf3103 domain-containing protein | VP_RS03120 | Not Available | - | 678752 - 679942 | 44186.0 |
| nad(+) kinase | VP_RS03125 | Q87RX6 | - | 680193 - 681077 | 32316.8 |
| nucleotide exchange factor grpe | VP_RS03130 | Q87RX5 | + | 681223 - 681819 | 22370.4 |
| dicarboxylate/amino acid:cation symporter | VP_RS03135 | P24944 | + | 682237 - 683511 | 44047.9 |
| molecular chaperone dnak | VP_RS03140 | Q87RX3 | + | 683859 - 685772 | 69058.8 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

