Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanyl-trna editing protein | VP_RS02945 | Not Available | + | 638387 - 639268 | 32800.8 |
| zinc ribbon domain-containing protein | VP_RS02950 | Not Available | + | 639562 - 639786 | 8453.94 |
| exodeoxyribonuclease vii large subunit | VP_RS02955 | Q87S09 | - | 639808 - 641139 | 49846.1 |
| imp dehydrogenase | VP_RS02960 | P0ADG8 | + | 641372 - 642838 | 51689.2 |
| glutamine-hydrolyzing gmp synthase | VP_RS02965 | Q87S07 | + | 642937 - 644490 | 57675.0 |
| na+/h+ antiporter nhac family protein | VP_RS02970 | Not Available | + | 644656 - 646176 | 54044.9 |
| chitinase | VP_RS02975 | P52404 | + | 646391 - 648115 | 63516.7 |
| acetate uptake transporter | VP_RS02980 | P0AC99 | + | 648287 - 648877 | 20931.2 |
| had family phosphatase | VP_RS02985 | Not Available | + | 649063 - 650043 | 36778.5 |
| sodium:alanine symporter family protein | VP_RS02990 | O32060 | - | 650148 - 651695 | 55189.6 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

