Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | VP_RS00190 | Q87TN4 | + | 40094 - 41578 | 54698.3 |
| ubiquinone biosynthesis accessory factor ubik | VP_RS00195 | Q46868 | - | 41762 - 42013 | 9631.71 |
| multidrug efflux rnd transporter permease subunit vmed | VP_RS00200 | Not Available | - | 42145 - 45267 | 112042.0 |
| multidrug efflux rnd transporter periplasmic adaptor subunit vmec | VP_RS00205 | Q57500 | - | 45279 - 46385 | 40448.8 |
| tetr/acrr family transcriptional regulator | VP_RS00210 | Not Available | - | 46404 - 46985 | 21596.6 |
| dna helicase rep | VP_RS00215 | Q9L6S1 | + | 47155 - 49170 | 77357.8 |
| cytochrome c5 family protein | VP_RS00220 | P11732 | - | 49263 - 49676 | 14436.1 |
| Trna-arg | Not Available | Not Available | + | 50014 - 50090 | Not Available |
| Trna-his | Not Available | Not Available | + | 50123 - 50198 | Not Available |
| Trna-pro | Not Available | Not Available | + | 50271 - 50347 | Not Available |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

