Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | VP_RS02845 | E9RGS4 | + | 618809 - 619756 | 34357.2 |
| inositol-1-monophosphatase | VP_RS02850 | Q9KTY5 | - | 619979 - 620782 | 29143.9 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | VP_RS02855 | A6TCF3 | + | 621014 - 621733 | 26723.2 |
| fe-s cluster assembly transcriptional regulator iscr | VP_RS02860 | Q87S29 | + | 621859 - 622365 | 17851.3 |
| iscs subfamily cysteine desulfurase | VP_RS02865 | Q87S28 | + | 622394 - 623608 | 44997.8 |
| fe-s cluster assembly scaffold iscu | VP_RS02870 | P0ACD6 | + | 623646 - 624029 | 13626.2 |
| iron-sulfur cluster assembly protein isca | VP_RS02875 | C5BEU3 | + | 624101 - 624424 | 11702.8 |
| co-chaperone hscb | VP_RS02880 | Q87S25 | + | 624480 - 624995 | 19830.6 |
| fe-s protein assembly chaperone hsca | VP_RS02885 | Q87S24 | + | 625017 - 626870 | 66098.7 |
| isc system 2fe-2s type ferredoxin | VP_RS02890 | P0A9R5 | + | 626883 - 627221 | 12287.5 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

