Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin c | VP_RS02795 | Q8K9W0 | - | 606398 - 607009 | 22238.4 |
| hydrogen peroxide-inducible genes activator | VP_RS02800 | P52667 | + | 607209 - 608114 | 33767.0 |
| malate synthase a | VP_RS02805 | P08997 | + | 608721 - 610349 | 61145.6 |
| isocitrate lyase | VP_RS02810 | P51066 | + | 610468 - 611778 | 48071.4 |
| cbs domain-containing protein | VP_RS02815 | P39066 | - | 611857 - 612315 | 17226.8 |
| trypsin-like serine protease | VP_RS02820 | P49275 | + | 612633 - 613781 | 41654.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | VP_RS02825 | Q87S37 | + | 614087 - 615139 | 39131.6 |
| trna guanosine(34) transglycosylase tgt | VP_RS02830 | Q87S36 | + | 615288 - 616421 | 43029.7 |
| preprotein translocase subunit yajc | VP_RS02835 | P0ADZ9 | + | 616587 - 616916 | 11840.7 |
| protein translocase subunit secd | VP_RS02840 | E9RGS3 | + | 616938 - 618794 | 66904.3 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

