Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 586685 - 586800 | Not Available |
| Trna-asp | Not Available | Not Available | + | 586831 - 586907 | Not Available |
| Trna-trp | Not Available | Not Available | + | 586943 - 587019 | Not Available |
| duf1904 domain-containing protein | VP_RS02710 | Not Available | + | 587386 - 587718 | 12593.7 |
| penicillin-insensitive murein endopeptidase | VP_RS02715 | Q1C665 | + | 587731 - 588567 | 31028.1 |
| hypothetical protein | VP_RS02720 | Not Available | + | 588888 - 589196 | 12194.5 |
| yfhl family 4fe-4s dicluster ferredoxin | VP_RS02725 | P44746 | - | 589239 - 589493 | 9277.24 |
| trna 5-hydroxyuridine modification protein yegq | VP_RS02730 | P76403 | - | 589496 - 590896 | 52588.4 |
| recombination-associated protein rdgc | VP_RS02735 | Q87S56 | - | 591062 - 591976 | 34356.4 |
| phosphate regulon transcriptional regulator phob | VP_RS02740 | P0AFJ6 | + | 592203 - 592892 | 26122.6 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

