Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | VP_RS02645 | P0AD51 | - | 573552 - 573878 | 12385.9 |
| lytic transglycosylase f | VP_RS02650 | A6VMD7 | - | 574209 - 575690 | 55554.7 |
| outer membrane protein assembly factor bamd | VP_RS02655 | Q9KU21 | - | 575825 - 576553 | 27850.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | VP_RS02660 | Q87S65 | + | 576690 - 577667 | 36606.0 |
| peptidoglycan editing factor pgef | VP_RS02665 | P44552 | + | 577669 - 578397 | 25982.7 |
| atp-dependent chaperone clpb | VP_RS02670 | Q87S63 | + | 578545 - 581118 | 95878.2 |
| 16s ribosomal rna | Not Available | Not Available | + | 581624 - 583176 | Not Available |
| Trna-ala | Not Available | Not Available | + | 583274 - 583349 | Not Available |
| Trna-glu | Not Available | Not Available | + | 583362 - 583437 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 583703 - 586593 | Not Available |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

