Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-n-acetylhexosaminidase | VP_RS02595 | A5F8Y1 | + | 562039 - 563022 | 36029.2 |
| 3-deoxy-7-phosphoheptulonate synthase | VP_RS02600 | P00888 | + | 563230 - 564303 | 39696.3 |
| bifunctional chorismate mutase/prephenate dehydrogenase | VP_RS02605 | P07023 | + | 564329 - 565456 | 42004.9 |
| m23 family metallopeptidase | VP_RS02610 | P44693 | - | 565519 - 566520 | 37086.9 |
| pilz domain-containing protein | VP_RS02615 | Not Available | - | 566549 - 566917 | 13892.7 |
| energy-dependent translational throttle protein etta | VP_RS02620 | P45127 | - | 567221 - 568888 | 62249.0 |
| murein transglycosylase | VP_RS02625 | P39434 | + | 569252 - 571198 | 74014.3 |
| trp operon repressor | VP_RS02630 | Q87S71 | + | 571212 - 571523 | 11763.2 |
| inosine/xanthosine triphosphatase | VP_RS02635 | Q87S70 | - | 571572 - 572105 | 19225.0 |
| prephenate dehydratase | VP_RS02640 | Q02286 | - | 572130 - 573308 | 44226.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

