Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | VP_RS02545 | Q87S89 | + | 552473 - 552982 | 19266.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | VP_RS02550 | P0AEM2 | + | 553139 - 553570 | 15367.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | VP_RS02555 | Q87S87 | + | 553595 - 554560 | 35723.6 |
| two-component system response regulator btsr | VP_RS02560 | Q87S86 | - | 554637 - 555365 | 26993.9 |
| sensor histidine kinase | VP_RS02565 | P0AD15 | - | 555397 - 557067 | 61063.7 |
| carbon starvation protein a | VP_RS02570 | O86233 | - | 557213 - 558697 | 53321.3 |
| duf2799 domain-containing protein | VP_RS02575 | Not Available | + | 558971 - 559312 | 12509.5 |
| hypothetical protein | VP_RS02580 | Not Available | + | 559452 - 559784 | 12876.2 |
| n-acetylmuramic acid 6-phosphate etherase | VP_RS02585 | Q87S81 | - | 559864 - 560790 | 32728.6 |
| anhydro-n-acetylmuramic acid kinase | VP_RS02590 | Q87S80 | - | 560827 - 561939 | 40308.4 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

