Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | VP_RS02495 | Q87SA1 | + | 539967 - 540788 | 30724.2 |
| thymidylate synthase | VP_RS02500 | Q87SA0 | + | 540798 - 541649 | 32781.9 |
| flavohemoglobin expression-modulating qegla motif protein | VP_RS02505 | Not Available | - | 541722 - 542879 | 43975.5 |
| na/pi symporter | VP_RS02510 | O97704 | - | 543172 - 544320 | 40362.9 |
| transcriptional activator nhar | VP_RS02515 | P52692 | + | 544705 - 545595 | 33951.0 |
| metalloregulator arsr/smtb family transcription factor | VP_RS02520 | P52695 | + | 545888 - 546184 | 11218.7 |
| 30s ribosomal protein s20 | VP_RS02525 | Q87S93 | - | 546383 - 546643 | 9536.79 |
| murein biosynthesis integral membrane protein murj | VP_RS02530 | O34238 | + | 546938 - 548500 | 56701.3 |
| bifunctional riboflavin kinase/fad synthetase | VP_RS02535 | P0AG42 | + | 548571 - 549506 | 34933.3 |
| isoleucine--trna ligase | VP_RS02540 | Q87S90 | + | 549571 - 552399 | 105284.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

