Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | VP_RS00140 | P44842 | + | 30512 - 31135 | 22214.8 |
| trkh family potassium uptake protein | VP_RS00145 | Q87TN7 | + | 31182 - 32639 | 53066.8 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | VP_RS00150 | Q9L6L1 | + | 32649 - 33176 | 20567.8 |
| 16s ribosomal rna | Not Available | Not Available | + | 33631 - 35183 | Not Available |
| Trna-glu | Not Available | Not Available | + | 35273 - 35348 | Not Available |
| Trna-lys | Not Available | Not Available | + | 35351 - 35426 | Not Available |
| Trna-val | Not Available | Not Available | + | 35457 - 35532 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 35852 - 38742 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 38834 - 38949 | Not Available |
| hth-type transcriptional activator ilvy | VP_RS00185 | P44821 | - | 39060 - 39950 | 32966.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

