Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | VP_RS02245 | Q87SF4 | + | 474811 - 475950 | 41028.7 |
| carbamoyl-phosphate synthase large subunit | VP_RS02250 | Q87SF3 | + | 475967 - 479200 | 117870.0 |
| hypothetical protein | VP_RS02255 | Not Available | - | 479757 - 480179 | 16433.4 |
| hypothetical protein | VP_RS02260 | Not Available | - | 480176 - 480955 | 28276.5 |
| tsup family transporter | VP_RS02265 | Not Available | + | 481190 - 481969 | 27425.3 |
| lysr family transcriptional regulator | VP_RS02270 | Q9KPI4 | - | 481905 - 482765 | 31969.1 |
| tric cation channel family protein | VP_RS02275 | Q9KPI5 | - | 482898 - 483518 | 22022.9 |
| vitamin b12 abc transporter substrate-binding protein btuf | VP_RS02280 | Q87SE7 | - | 483590 - 484414 | 31018.9 |
| cobalamin biosynthesis family protein | VP_RS02285 | Q9I469 | - | 484414 - 485367 | 35269.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | VP_RS02290 | Q87SE5 | - | 485380 - 486075 | 24749.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

