Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | VP_RS23340 | Not Available | - | 1830038 - 1830487 | 16221.8 |
| arac family transcriptional regulator | VP_RS23345 | Not Available | + | 1830852 - 1831775 | 34399.3 |
| arginine deiminase-related protein | VP_RS23350 | Not Available | - | 1831888 - 1832889 | 37153.1 |
| abc transporter atp-binding protein | VP_RS23355 | Not Available | + | 1833293 - 1835143 | 68565.3 |
| duf445 domain-containing protein | VP_RS23360 | Not Available | + | 1835739 - 1836446 | 26055.1 |
| lrp/asnc family transcriptional regulator | VP_RS23365 | Not Available | - | 1836527 - 1837003 | 18028.9 |
| hypothetical protein | VP_RS23690 | Not Available | + | 1837326 - 1837493 | 6187.3 |
| hypothetical protein | VP_RS23370 | Not Available | - | 1837501 - 1837749 | 9348.37 |
| gnat family n-acetyltransferase | VP_RS23375 | Not Available | + | 1838110 - 1838643 | 20107.6 |
| hypothetical protein | VP_RS23380 | Not Available | + | 1838662 - 1839096 | 16635.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

