Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | VP_RS23295 | P43020 | - | 1820863 - 1821846 | 36135.1 |
| trap transporter small permease | VP_RS23300 | Not Available | + | 1822168 - 1822683 | 18926.8 |
| trap transporter large permease | VP_RS23305 | P40800 | + | 1822695 - 1823996 | 45288.8 |
| fructuronate reductase | VP_RS23310 | P39160 | + | 1824048 - 1825514 | 53512.9 |
| glucuronate isomerase | VP_RS23315 | Q87FH3 | + | 1825524 - 1826936 | 53990.0 |
| sugar kinase | VP_RS23320 | P44482 | + | 1826940 - 1827917 | 35099.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | VP_RS23325 | Not Available | + | 1827927 - 1828556 | 22192.1 |
| ygjv family protein | VP_RS23330 | Not Available | + | 1828647 - 1829198 | 20495.2 |
| carboxymuconolactone decarboxylase family protein | VP_RS23335 | Not Available | - | 1829159 - 1829809 | 23441.0 |
| hypothetical protein | VP_RS23920 | Not Available | - | 1829868 - 1830002 | 4665.56 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

